Protein–RNA interactions for Protein: Q9QZQ0

Npas3, Neuronal PAS domain-containing protein 3, mousemouse

Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas3Q9QZQ0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.04□□□□□ -0.16
Npas3Q9QZQ0 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.04□□□□□ -0.16
Npas3Q9QZQ0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Gm15920-201ENSMUST00000118998 402 ntBASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas3Q9QZQ0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Npas3Q9QZQ0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas3Q9QZQ0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas3Q9QZQ0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas3Q9QZQ0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.02□□□□□ -0.16
Npas3Q9QZQ0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas3Q9QZQ0 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.02□□□□□ -0.16
Npas3Q9QZQ0 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Gm2272-201ENSMUST00000194903 582 ntBASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas3Q9QZQ0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm16198-201ENSMUST00000118766 670 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm13365-201ENSMUST00000121188 973 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm11745-201ENSMUST00000121669 448 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Rpph1-201ENSMUST00000175096 319 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm20553-201ENSMUST00000204205 844 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Npas3Q9QZQ0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas3Q9QZQ0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npas3Q9QZQ0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Npas3Q9QZQ0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Npas3Q9QZQ0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms