Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn5Q9JL35 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn5Q9JL35 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.13■□□□□ 0.33
Hmgn5Q9JL35 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgn5Q9JL35 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.13■□□□□ 0.33
Hmgn5Q9JL35 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmgn5Q9JL35 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hmgn5Q9JL35 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgn5Q9JL35 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Gm11355-201ENSMUST00000121120 306 ntBASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Gm25406-201ENSMUST00000157599 105 ntBASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Gm45058-201ENSMUST00000205810 766 ntBASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.09■□□□□ 0.33
Hmgn5Q9JL35 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn5Q9JL35 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn5Q9JL35 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn5Q9JL35 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn5Q9JL35 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Hmgn5Q9JL35 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgn5Q9JL35 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms