Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Gm11927-201ENSMUST00000118472 759 ntBASIC12.25□□□□□ -0.45
Smco4Q9JIS3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Gm10138-203ENSMUST00000206952 366 ntBASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco4Q9JIS3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Gm7291-201ENSMUST00000199147 382 ntBASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.24□□□□□ -0.45
Smco4Q9JIS3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smco4Q9JIS3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Rubie-203ENSMUST00000227803 2430 ntBASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smco4Q9JIS3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms