Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl28Q9JIL2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccl28Q9JIL2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Efs-202ENSMUST00000227037 2540 ntBASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Gm7506-201ENSMUST00000207758 815 ntBASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Gm19164-201ENSMUST00000210667 640 ntBASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Gm18622-201ENSMUST00000219361 595 ntBASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccl28Q9JIL2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl28Q9JIL2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms