Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps35Q9EQH3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Gm13036-201ENSMUST00000117799 748 ntBASIC15.23■□□□□ 0.03
Vps35Q9EQH3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.23■□□□□ 0.03
Vps35Q9EQH3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 BC037039-201ENSMUST00000192003 2205 ntBASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps35Q9EQH3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps35Q9EQH3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms