Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Celf4-206ENSMUST00000224553 1729 ntBASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Gm10499-201ENSMUST00000174094 934 ntBASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Gm6550-201ENSMUST00000187574 993 ntBASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Gm28659-201ENSMUST00000188013 759 ntBASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Chmp4bQ9D8B3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Gm5682-201ENSMUST00000173402 505 ntBASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4bQ9D8B3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4bQ9D8B3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms