Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
U2af1Q9D883 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Gm27397-201ENSMUST00000184997 107 ntBASIC19.97■□□□□ 0.79
U2af1Q9D883 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.97■□□□□ 0.79
U2af1Q9D883 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
U2af1Q9D883 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
U2af1Q9D883 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.97■□□□□ 0.79
U2af1Q9D883 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.97■□□□□ 0.79
U2af1Q9D883 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
U2af1Q9D883 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.96■□□□□ 0.79
U2af1Q9D883 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.96■□□□□ 0.79
U2af1Q9D883 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.96■□□□□ 0.79
U2af1Q9D883 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
U2af1Q9D883 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.96■□□□□ 0.79
U2af1Q9D883 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.96■□□□□ 0.79
U2af1Q9D883 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
U2af1Q9D883 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Gm16198-201ENSMUST00000118766 670 ntBASIC19.95■□□□□ 0.78
U2af1Q9D883 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Gm27301-201ENSMUST00000184012 127 ntBASIC19.95■□□□□ 0.78
U2af1Q9D883 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.95■□□□□ 0.78
U2af1Q9D883 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.95■□□□□ 0.78
U2af1Q9D883 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
U2af1Q9D883 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
U2af1Q9D883 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
U2af1Q9D883 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.94■□□□□ 0.78
U2af1Q9D883 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.94■□□□□ 0.78
U2af1Q9D883 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1Q9D883 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.93■□□□□ 0.78
U2af1Q9D883 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Gm9385-201ENSMUST00000117563 472 ntBASIC19.93■□□□□ 0.78
U2af1Q9D883 Gm2756-201ENSMUST00000195851 400 ntBASIC19.93■□□□□ 0.78
U2af1Q9D883 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.93■□□□□ 0.78
U2af1Q9D883 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1Q9D883 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms