Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps33aQ9D2N9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Timm23-208ENSMUST00000226683 750 ntBASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps33aQ9D2N9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps33aQ9D2N9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps33aQ9D2N9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps33aQ9D2N9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps33aQ9D2N9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms