Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim42Q9D2H5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Gm12134-201ENSMUST00000122109 520 ntBASIC15.23■□□□□ 0.03
Trim42Q9D2H5 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Gm7367-201ENSMUST00000057611 492 ntBASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.23■□□□□ 0.03
Trim42Q9D2H5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim42Q9D2H5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim42Q9D2H5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim42Q9D2H5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim42Q9D2H5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim42Q9D2H5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim42Q9D2H5 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.21■□□□□ 0.02
Trim42Q9D2H5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim42Q9D2H5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim42Q9D2H5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim42Q9D2H5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim42Q9D2H5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim42Q9D2H5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim42Q9D2H5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim42Q9D2H5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms