Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.33□□□□□ -0.12
Chaf1bQ9D0N7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Grk6-207ENSMUST00000225925 2769 ntBASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Gm18101-201ENSMUST00000215769 548 ntBASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Gm9987-201ENSMUST00000069768 567 ntBASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chaf1bQ9D0N7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chaf1bQ9D0N7 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1bQ9D0N7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms