Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Gm9987-201ENSMUST00000069768 567 ntBASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Raet1eQ9CZQ6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Raet1eQ9CZQ6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Raet1eQ9CZQ6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1eQ9CZQ6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms