Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snf8Q9CZ28 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snf8Q9CZ28 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.67■□□□□ 0.1
Snf8Q9CZ28 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snf8Q9CZ28 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms