Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm13226-201ENSMUST00000117838 404 ntBASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm37424-201ENSMUST00000191727 561 ntBASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnaseh2aQ9CWY8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm15678-201ENSMUST00000117573 960 ntBASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm27631-201ENSMUST00000184163 466 ntBASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.97■□□□□ 0.47
Rnaseh2aQ9CWY8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm6222-201ENSMUST00000120787 396 ntBASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Snora78-201ENSMUST00000158630 128 ntBASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnaseh2aQ9CWY8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.96■□□□□ 0.46
Rnaseh2aQ9CWY8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rnaseh2aQ9CWY8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnaseh2aQ9CWY8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnaseh2aQ9CWY8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnaseh2aQ9CWY8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnaseh2aQ9CWY8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnaseh2aQ9CWY8 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.94■□□□□ 0.46
Rnaseh2aQ9CWY8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms