Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.5■□□□□ 0.07
Cldnd1Q9CQX5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Gm29667-201ENSMUST00000190817 490 ntBASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cldnd1Q9CQX5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Asic1-205ENSMUST00000228185 1818 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Gm9719-201ENSMUST00000162765 543 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Gm6180-201ENSMUST00000065243 498 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cldnd1Q9CQX5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Shd-206ENSMUST00000225145 998 ntBASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.47■□□□□ 0.07
Cldnd1Q9CQX5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms