Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Gm43509-201ENSMUST00000196551 2594 ntBASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rpl39lQ9CQD0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 H2-K2-201ENSMUST00000174250 1049 ntBASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Gm3807-201ENSMUST00000193520 1168 ntBASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC9.94□□□□□ -0.82
Rpl39lQ9CQD0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Gm10849-201ENSMUST00000100397 618 ntBASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Gm26571-201ENSMUST00000181399 666 ntBASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Nupl1-207ENSMUST00000225311 2475 ntBASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39lQ9CQD0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Nrn1-203ENSMUST00000223611 1443 ntBASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39lQ9CQD0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms