Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.2□□□□□ -0.3
2210010C04RikQ9CPN9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
2210010C04RikQ9CPN9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
2210010C04RikQ9CPN9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
2210010C04RikQ9CPN9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
2210010C04RikQ9CPN9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
2210010C04RikQ9CPN9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
2210010C04RikQ9CPN9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
2210010C04RikQ9CPN9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gm14859-201ENSMUST00000117752 357 ntBASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
2210010C04RikQ9CPN9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms