Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tlr3Q99MB1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tlr3Q99MB1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tlr3Q99MB1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tlr3Q99MB1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tlr3Q99MB1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tlr3Q99MB1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tlr3Q99MB1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Gm15590-201ENSMUST00000078419 552 ntBASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tlr3Q99MB1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Gm7787-201ENSMUST00000216858 688 ntBASIC16.3■□□□□ 0.2
Tlr3Q99MB1 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tlr3Q99MB1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tlr3Q99MB1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms