Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cstf1Q99LC2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cstf1Q99LC2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cstf1Q99LC2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Gm27306-201ENSMUST00000183970 107 ntBASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.19■□□□□ 0.02
Cstf1Q99LC2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cstf1Q99LC2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Gm6415-201ENSMUST00000118488 348 ntBASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Gm2272-201ENSMUST00000194903 582 ntBASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cstf1Q99LC2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Gm38294-201ENSMUST00000192831 381 ntBASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms