Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm18049-201ENSMUST00000208909 581 ntBASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Gm27920-201ENSMUST00000183953 96 ntBASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd2Q99JR8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Gm23547-201ENSMUST00000158210 271 ntBASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Mir8102-201ENSMUST00000184148 139 ntBASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Gm38294-201ENSMUST00000192831 381 ntBASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Smarcd2Q99JR8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm5866-201ENSMUST00000177881 973 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm25144-201ENSMUST00000179561 110 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm25352-201ENSMUST00000179815 110 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm27989-201ENSMUST00000184721 107 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm29541-201ENSMUST00000191351 678 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm6888-201ENSMUST00000221983 706 ntBASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms