Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.49■□□□□ 0.39
Rfc4Q99J62 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Gm6415-201ENSMUST00000118488 348 ntBASIC17.49■□□□□ 0.39
Rfc4Q99J62 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Gm5866-201ENSMUST00000177881 973 ntBASIC17.49■□□□□ 0.39
Rfc4Q99J62 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Gm13223-201ENSMUST00000118609 747 ntBASIC17.48■□□□□ 0.39
Rfc4Q99J62 Gm2810-201ENSMUST00000118681 990 ntBASIC17.48■□□□□ 0.39
Rfc4Q99J62 Gm12151-201ENSMUST00000121374 290 ntBASIC17.48■□□□□ 0.39
Rfc4Q99J62 Gm27618-201ENSMUST00000183671 60 ntBASIC17.48■□□□□ 0.39
Rfc4Q99J62 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.48■□□□□ 0.39
Rfc4Q99J62 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc4Q99J62 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfc4Q99J62 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Gm9824-201ENSMUST00000178707 561 ntBASIC17.47■□□□□ 0.39
Rfc4Q99J62 Gm17837-201ENSMUST00000186435 985 ntBASIC17.47■□□□□ 0.39
Rfc4Q99J62 Gm38225-201ENSMUST00000194001 393 ntBASIC17.47■□□□□ 0.39
Rfc4Q99J62 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.47■□□□□ 0.39
Rfc4Q99J62 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Dancr-204ENSMUST00000132389 2347 ntBASIC17.47■□□□□ 0.39
Rfc4Q99J62 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc4Q99J62 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.46■□□□□ 0.39
Rfc4Q99J62 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Gm16026-204ENSMUST00000162652 683 ntBASIC17.46■□□□□ 0.39
Rfc4Q99J62 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Gm27306-201ENSMUST00000183970 107 ntBASIC17.46■□□□□ 0.39
Rfc4Q99J62 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.46■□□□□ 0.39
Rfc4Q99J62 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rfc4Q99J62 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rfc4Q99J62 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc4Q99J62 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc4Q99J62 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc4Q99J62 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc4Q99J62 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms