Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1aQ921W0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Gm37055-201ENSMUST00000191866 133 ntBASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp1aQ921W0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gm21559-201ENSMUST00000220638 855 ntBASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gm8587-201ENSMUST00000076538 843 ntBASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp1aQ921W0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Gm11355-201ENSMUST00000121120 306 ntBASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms