Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.55■□□□□ 0.4
Smc1bQ920F6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smc1bQ920F6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Gm7787-201ENSMUST00000216858 688 ntBASIC17.53■□□□□ 0.4
Smc1bQ920F6 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.53■□□□□ 0.4
Smc1bQ920F6 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.53■□□□□ 0.4
Smc1bQ920F6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smc1bQ920F6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Smc1bQ920F6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.52■□□□□ 0.4
Smc1bQ920F6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.52■□□□□ 0.4
Smc1bQ920F6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Smc1bQ920F6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc1bQ920F6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smc1bQ920F6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Smc1bQ920F6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smc1bQ920F6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smc1bQ920F6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Smc1bQ920F6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smc1bQ920F6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.51■□□□□ 0.39
Smc1bQ920F6 Gm44335-201ENSMUST00000196879 141 ntBASIC17.51■□□□□ 0.39
Smc1bQ920F6 Gm43438-201ENSMUST00000198133 379 ntBASIC17.51■□□□□ 0.39
Smc1bQ920F6 Gm44297-201ENSMUST00000198304 141 ntBASIC17.51■□□□□ 0.39
Smc1bQ920F6 Gm44346-201ENSMUST00000198851 141 ntBASIC17.51■□□□□ 0.39
Smc1bQ920F6 Gm45612-201ENSMUST00000211320 160 ntBASIC17.51■□□□□ 0.39
Smc1bQ920F6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smc1bQ920F6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms