Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha11Q91Y19 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha11Q91Y19 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha11Q91Y19 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Gm17271-201ENSMUST00000165535 355 ntBASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha11Q91Y19 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Gm10175-201ENSMUST00000086013 645 ntBASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha11Q91Y19 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha11Q91Y19 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha11Q91Y19 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha11Q91Y19 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Gm12008-201ENSMUST00000117791 755 ntBASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Sybu-209ENSMUST00000228639 4113 ntBASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha11Q91Y19 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha11Q91Y19 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha11Q91Y19 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.94■□□□□ 0.14
Pcdha11Q91Y19 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha11Q91Y19 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha11Q91Y19 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdha11Q91Y19 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdha11Q91Y19 Gm4995-201ENSMUST00000117247 432 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms