Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm28659-201ENSMUST00000188013 759 ntBASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb1Q91Y08 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Gm7787-201ENSMUST00000216858 688 ntBASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb1Q91Y08 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb1Q91Y08 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 AV026068-213ENSMUST00000223675 1171 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms