Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Gm8318-201ENSMUST00000182954 872 ntBASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Celf4-206ENSMUST00000224553 1729 ntBASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb15Q91Y04 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Gm7284-201ENSMUST00000131667 944 ntBASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb15Q91Y04 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhb15Q91Y04 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.08■□□□□ 0.33
Pcdhb15Q91Y04 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Gm15372-201ENSMUST00000120729 834 ntBASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Gm13836-201ENSMUST00000121159 501 ntBASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb15Q91Y04 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb15Q91Y04 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms