Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 AC153899.1-201ENSMUST00000214092 1117 ntBASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 AC153522.1-201ENSMUST00000220047 1090 ntBASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm8000-201ENSMUST00000188378 592 ntBASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb20Q91XZ9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Gm9727-201ENSMUST00000161387 555 ntBASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Gm45701-201ENSMUST00000212049 235 ntBASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 AC139323.1-201ENSMUST00000223370 1040 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms