Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb22Q91XZ8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Gm12008-201ENSMUST00000117791 755 ntBASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb22Q91XZ8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb22Q91XZ8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb22Q91XZ8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb22Q91XZ8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb22Q91XZ8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb22Q91XZ8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms