Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb3Q91XZ7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Gm6623-201ENSMUST00000173570 544 ntBASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Gm44450-201ENSMUST00000199528 114 ntBASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb3Q91XZ7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Mir770-201ENSMUST00000103252 94 ntBASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Gm27741-201ENSMUST00000185060 237 ntBASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb3Q91XZ7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Gm17807-201ENSMUST00000186869 298 ntBASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb3Q91XZ7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms