Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Gm4899-201ENSMUST00000178708 719 ntBASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb6Q91XZ4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb6Q91XZ4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb6Q91XZ4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms