Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc5Q91XW9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Gm11745-201ENSMUST00000121669 448 ntBASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc5Q91XW9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Gm5177-201ENSMUST00000183092 997 ntBASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc5Q91XW9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Gm15427-201ENSMUST00000117288 531 ntBASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Gm5312-201ENSMUST00000203728 547 ntBASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc5Q91XW9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc5Q91XW9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms