Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.37■□□□□ 0.37
Trex1Q91XB0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.37■□□□□ 0.37
Trex1Q91XB0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trex1Q91XB0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm15693-201ENSMUST00000120470 637 ntBASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm38225-201ENSMUST00000194001 393 ntBASIC17.36■□□□□ 0.37
Trex1Q91XB0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.36■□□□□ 0.37
Trex1Q91XB0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.36■□□□□ 0.37
Trex1Q91XB0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Dancr-204ENSMUST00000132389 2347 ntBASIC17.36■□□□□ 0.37
Trex1Q91XB0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trex1Q91XB0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.35■□□□□ 0.37
Trex1Q91XB0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.35■□□□□ 0.37
Trex1Q91XB0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trex1Q91XB0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trex1Q91XB0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms