Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Gm25925-201ENSMUST00000158314 306 ntBASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Gm19164-201ENSMUST00000210667 640 ntBASIC17.47■□□□□ 0.39
Ddx41Q91VN6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.47■□□□□ 0.39
Ddx41Q91VN6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx41Q91VN6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Gm27300-201ENSMUST00000184085 97 ntBASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Gm27335-201ENSMUST00000184758 97 ntBASIC17.46■□□□□ 0.39
Ddx41Q91VN6 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx41Q91VN6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.46■□□□□ 0.38
Ddx41Q91VN6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Ddx41Q91VN6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Gm25911-201ENSMUST00000157621 56 ntBASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ddx41Q91VN6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm23935-201ENSMUST00000102303 57 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm24270-201ENSMUST00000102326 57 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm24245-201ENSMUST00000157318 57 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm24513-201ENSMUST00000174964 138 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Mir3113-201ENSMUST00000175478 76 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Mir8117-201ENSMUST00000184773 107 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx41Q91VN6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx41Q91VN6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms