Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vsx1Q91V10 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx1Q91V10 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vsx1Q91V10 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vsx1Q91V10 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx1Q91V10 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.03■□□□□ -0
Vsx1Q91V10 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Gm12008-201ENSMUST00000117791 755 ntBASIC15.03■□□□□ -0
Vsx1Q91V10 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.03■□□□□ -0
Vsx1Q91V10 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.03■□□□□ -0
Vsx1Q91V10 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vsx1Q91V10 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.03■□□□□ -0
Vsx1Q91V10 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx1Q91V10 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vsx1Q91V10 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vsx1Q91V10 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vsx1Q91V10 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vsx1Q91V10 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vsx1Q91V10 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vsx1Q91V10 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.02■□□□□ -0
Vsx1Q91V10 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Gm27989-201ENSMUST00000184721 107 ntBASIC15.02■□□□□ -0
Vsx1Q91V10 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.02■□□□□ -0
Vsx1Q91V10 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vsx1Q91V10 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Vsx1Q91V10 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vsx1Q91V10 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vsx1Q91V10 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vsx1Q91V10 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vsx1Q91V10 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms