Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Gm15358-201ENSMUST00000119249 520 ntBASIC12.76□□□□□ -0.37
H1fooQ8VIK3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Gm28033-201ENSMUST00000184224 96 ntBASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H1fooQ8VIK3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H1fooQ8VIK3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H1fooQ8VIK3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms