Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.08■□□□□ 0.16
SfpqQ8VIJ6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SfpqQ8VIJ6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SfpqQ8VIJ6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SfpqQ8VIJ6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Gm44454-201ENSMUST00000198541 138 ntBASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SfpqQ8VIJ6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SfpqQ8VIJ6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Gm29518-201ENSMUST00000190858 372 ntBASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Gm10252-201ENSMUST00000209541 832 ntBASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms