Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh18Q8VHR0 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.73□□□□□ -0.05
Pcdh18Q8VHR0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh18Q8VHR0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh18Q8VHR0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Rubie-203ENSMUST00000227803 2430 ntBASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh18Q8VHR0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Pcdh18Q8VHR0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Gm5587-201ENSMUST00000206270 674 ntBASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh18Q8VHR0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh18Q8VHR0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms