Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Gm9987-201ENSMUST00000069768 567 ntBASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rab40cQ8VHQ4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Gm7889-201ENSMUST00000185591 958 ntBASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Gm18959-201ENSMUST00000208954 655 ntBASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Rab40cQ8VHQ4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms