Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps39Q8R5L3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps39Q8R5L3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms