Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zcchc9Q8R1J3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Mir6956-201ENSMUST00000183598 62 ntBASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Gm44872-201ENSMUST00000207864 420 ntBASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Zcchc9Q8R1J3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Gm5177-201ENSMUST00000183092 997 ntBASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Gm45747-201ENSMUST00000212203 999 ntBASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zcchc9Q8R1J3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zcchc9Q8R1J3 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms