Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx54Q8K4L0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Mir6392-201ENSMUST00000184924 108 ntBASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx54Q8K4L0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Gm10766-202ENSMUST00000194123 606 ntBASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ddx54Q8K4L0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Ddx54Q8K4L0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Gm12960-201ENSMUST00000120017 1066 ntBASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx54Q8K4L0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Gm3436-201ENSMUST00000179930 840 ntBASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx54Q8K4L0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Gm28760-201ENSMUST00000185995 736 ntBASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Gm5035-201ENSMUST00000215581 927 ntBASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms