Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Celf4-206ENSMUST00000224553 1729 ntBASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab11fip3Q8CHD8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab11fip3Q8CHD8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab11fip3Q8CHD8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm22065-201ENSMUST00000103753 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm22066-201ENSMUST00000103761 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm24932-201ENSMUST00000103763 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm24115-201ENSMUST00000103799 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm22190-201ENSMUST00000103827 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm22191-201ENSMUST00000103831 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm24721-201ENSMUST00000103849 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm28018-201ENSMUST00000103869 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm26399-201ENSMUST00000103937 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm25349-201ENSMUST00000177728 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm23616-201ENSMUST00000177797 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm25871-201ENSMUST00000177816 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm24752-201ENSMUST00000178240 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm24496-201ENSMUST00000178287 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm25649-201ENSMUST00000178476 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm25548-201ENSMUST00000178681 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm23147-201ENSMUST00000178841 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm26095-201ENSMUST00000179270 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm22171-201ENSMUST00000179283 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm23936-201ENSMUST00000179354 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm22619-201ENSMUST00000179516 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm25255-201ENSMUST00000179579 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm24755-201ENSMUST00000179691 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm26506-201ENSMUST00000179692 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm25086-201ENSMUST00000179931 110 ntBASIC19.59■□□□□ 0.73
Rab11fip3Q8CHD8 Gm23243-201ENSMUST00000180047 110 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms