Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 App-207ENSMUST00000227737 2827 ntBASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Csnka2ipQ8CH19 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Gm7787-201ENSMUST00000216858 688 ntBASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Csnka2ipQ8CH19 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Gm27702-201ENSMUST00000184512 56 ntBASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Gm2213-201ENSMUST00000197485 688 ntBASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Csnka2ipQ8CH19 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Mir3113-201ENSMUST00000175478 76 ntBASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Csnka2ipQ8CH19 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms