Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ShfQ8CG80 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
ShfQ8CG80 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.58□□□□□ -0.24
ShfQ8CG80 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.58□□□□□ -0.24
ShfQ8CG80 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.58□□□□□ -0.24
ShfQ8CG80 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ShfQ8CG80 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.57□□□□□ -0.24
ShfQ8CG80 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Gm8097-201ENSMUST00000117903 829 ntBASIC13.57□□□□□ -0.24
ShfQ8CG80 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.57□□□□□ -0.24
ShfQ8CG80 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ShfQ8CG80 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ShfQ8CG80 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ShfQ8CG80 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.56□□□□□ -0.24
ShfQ8CG80 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ShfQ8CG80 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ShfQ8CG80 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
ShfQ8CG80 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ShfQ8CG80 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.55□□□□□ -0.24
ShfQ8CG80 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ShfQ8CG80 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms