Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa4Q8CA71 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa4Q8CA71 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa4Q8CA71 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa4Q8CA71 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa4Q8CA71 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa4Q8CA71 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa4Q8CA71 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Gm10154-201ENSMUST00000084445 354 ntBASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa4Q8CA71 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.57■□□□□ 0.4
Shisa4Q8CA71 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Gm44872-201ENSMUST00000207864 420 ntBASIC17.57■□□□□ 0.4
Shisa4Q8CA71 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa4Q8CA71 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Shisa4Q8CA71 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms