Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp44Q8C2S0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Gm12008-201ENSMUST00000117791 755 ntBASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 AW822252-206ENSMUST00000208904 237 ntBASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp44Q8C2S0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Gm9727-201ENSMUST00000161387 555 ntBASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Usp44Q8C2S0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp44Q8C2S0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp44Q8C2S0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Usp44Q8C2S0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp44Q8C2S0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Efs-202ENSMUST00000227037 2540 ntBASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Gm17968-201ENSMUST00000194902 784 ntBASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Usp44Q8C2S0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Gm27525-201ENSMUST00000184465 107 ntBASIC17.75■□□□□ 0.43
Usp44Q8C2S0 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms