Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trerf1Q8BXJ2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Gm11452-201ENSMUST00000122376 690 ntBASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trerf1Q8BXJ2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.04■□□□□ 0.16
Trerf1Q8BXJ2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms