Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarcal1Q8BJL0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Gm38225-201ENSMUST00000194001 393 ntBASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Gm5779-201ENSMUST00000218467 910 ntBASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcal1Q8BJL0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcal1Q8BJL0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcal1Q8BJL0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.13■□□□□ 0.17
Smarcal1Q8BJL0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms