Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Ank2-226ENSMUST00000189368 339 ntBASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Gm21362-201ENSMUST00000194272 928 ntBASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Gm19164-201ENSMUST00000210667 640 ntBASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc40Q8BI79 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Gm8344-201ENSMUST00000119813 856 ntBASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Gm7506-201ENSMUST00000207758 815 ntBASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Gm18622-201ENSMUST00000219361 595 ntBASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Gm8655-201ENSMUST00000221159 852 ntBASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc40Q8BI79 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 App-207ENSMUST00000227737 2827 ntBASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc40Q8BI79 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc40Q8BI79 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms