Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc5a7Q8BGY9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc5a7Q8BGY9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Slc5a7Q8BGY9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.33□□□□□ -0.27
Slc5a7Q8BGY9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Slc5a7Q8BGY9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc5a7Q8BGY9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc5a7Q8BGY9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc5a7Q8BGY9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Mir1668-201ENSMUST00000184114 107 ntBASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Carlr-201ENSMUST00000181515 2574 ntBASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc5a7Q8BGY9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc5a7Q8BGY9 Mir5122-201ENSMUST00000175004 89 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms