Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Asic1-205ENSMUST00000228185 1818 ntBASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim23Q8BGX0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim23Q8BGX0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Gm10175-201ENSMUST00000086013 645 ntBASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim23Q8BGX0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Gm12008-201ENSMUST00000117791 755 ntBASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim23Q8BGX0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.65□□□□□ -0.07
Trim23Q8BGX0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim23Q8BGX0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms